Figure 2.

Performance comparison between HPeak (using data from both treated and untreated samples or using data from treated sample only) and other ChIP-Seq analysis algorithms. A. NRSF ChIP-Seq data: Chi-square test statistics of motif enrichment comparing original sequences under peaks and a set of random control sequences. B. STAT1 ChIP-Seq data: Chi-square test statistics of motif enrichment comparing original sequences under peaks and a set of random control sequences.

Qin et al. BMC Bioinformatics 2010 11:369   doi:10.1186/1471-2105-11-369
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