Mapping of the inferred binding site. Inferred binding site of peptide deformylase P.aeruginosa (PDB:1IX1) mapped onto the sequence of Helicobacter pyroli and its agreement with the observed binding site in N-trans-caffeoyltyramin-PDF complex (PDB: 1EW5). MMDB residue numbering is used which starts from the beginning of the corresponding GenBank protein sequence.
Thangudu et al. BMC Bioinformatics 2010 11:365 doi:10.1186/1471-2105-11-365