Table 1 |
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|
Statistics of human tandem splice sites in TassDB2. |
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|
Donors #% |
Acceptors #% |
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|
|
|
|||||||
|
Delta |
Tandem splice sites |
Confirmed* alternative |
Tandem splice sites |
Confirmed alternative |
||||
|
|
|
|||||||
|
2 |
9,825 |
1.9 |
164 |
1.7 |
11,135 |
6.7 |
252 |
2.3 |
|
3 |
11,164 |
2.2 |
166 |
1.5 |
12,542 |
7.5 |
2,272 |
18.1 |
|
4 |
130,104 |
25.3 |
955 |
0.7 |
11,852 |
7.1 |
961 |
8.1 |
|
5 |
36,643 |
7.1 |
269 |
0.7 |
11,314 |
6.8 |
609 |
5.4 |
|
6 |
54,142 |
10.5 |
275 |
0.5 |
16,495 |
9.9 |
396 |
2.4 |
|
7 |
45,161 |
8,8 |
150 |
0.3 |
17,290 |
10.4 |
179 |
1.0 |
|
8 |
42,670 |
8.3 |
150 |
0.4 |
15,386 |
9.2 |
175 |
1.1 |
|
9 |
46,688 |
9.1 |
249 |
0.5 |
18,645 |
11.2 |
212 |
1.1 |
|
10 |
47,092 |
9.1 |
217 |
0.5 |
17,294 |
10.4 |
160 |
0.9 |
|
11 |
44,831 |
8.7 |
157 |
0.4 |
15,832 |
9.5 |
123 |
0.8 |
|
12 |
46,654 |
9.1 |
267 |
0.6 |
18,819 |
11.3 |
204 |
1.1 |
|
|
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|
Total |
514,974 |
100.0 |
3,019 |
0.6 |
166,604 |
100.0 |
5,543 |
3.3 |
|
|
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|
* Tandem splice sites are considered confirmed if both splice forms have at least one supporting EST/mRNA. |
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|
Sinha et al. BMC Bioinformatics 2010 11:216 doi:10.1186/1471-2105-11-216 |
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