Table 2

Enriched pathways in the top 500 probe sets ranked by Notch pathway-guided COCA approach

Pathway Term

Count

%

p-value

FDR


Pentose and glucuronate interconversions

8

1.70%

1.64E-06

0.00001847

Notch signaling pathway

8

1.70%

5.65E-04

0.00640122

Porphyrin and chlorophyll metabolism

7

1.49%

6.28E-04

0.00719142

p53 signaling pathway

9

1.91%

9.87E-04

0.01107482

Cell cycle

11

2.34%

0.002362

0.02596788

Starch and sucrose metabolism

8

1.70%

0.002805

0.03161464

Androgen and estrogen metabolism

7

1.49%

0.002846

0.03237976

Polyunsaturated fatty acid biosynthesis

4

0.85%

0.015829

0.1738869

Metabolism of xenobiotics by cytochrome P450

7

1.49%

0.022415

0.2321759

Glycolysis/Gluconeogenesis

6

1.28%

0.024584

0.253719

Fructose and mannose metabolism

5

1.06%

0.054919

0.4893802

Galactose metabolism

4

0.85%

0.075736

0.6119058

PPAR signaling pathway

6

1.28%

0.083934

0.6456008


Wang et al. BMC Bioinformatics 2010 11:162   doi:10.1186/1471-2105-11-162

Open Data