Research article
Alignment and clustering of phylogenetic markers - implications for microbial diversity studies
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* Corresponding author: Mihai Pop mpop@umiacs.umd.edu
1 Applied Mathematics and Scientific Computation Program, University of Maryland - College Park, College Park, MD, 20742, USA
2 Department of Computer Science, University of Maryland - College Park, College Park, MD, 20742, USA
3 Center for Bioinformatics and Computational Biology, University of Maryland - College Park, College Park, MD, 20742, USA
4 Computational and Mathematical Biology Program, Genome Institute of Singapore, 138672, Singapore
BMC Bioinformatics 2010, 11:152 doi:10.1186/1471-2105-11-152
Published: 24 March 2010Additional files
Additional file 1:
Variation of information distances of high-level taxonomic clusterings from the annotated species clustering. To give the reader some intuition about the VI distance metric, we computed VI distances between the annotated species-level clustering and other clusterings based on phylum, class, order, family, and genus annotations. This file contains a table of these reference distances.
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