Table 2

Taxonomic breakdown for Intergenic ORFs. The top ten taxonomic Orders with respect to intergenic ORFs, number of replicons, number of bases, and avg. gc content.

Tax. Order

Num. ORFs

Frac. ORFs

Num. Replicons

Num. Mbp

Frac. Mbp

Avg. GC


Burkholderiales

198,068

0.14

105

246.44

0.10

0.64

Rhizobiales

148,195

0.11

99

196.98

0.08

0.60

Enterobacteriales

137,185

0.10

133

234.1

0.09

0.47

Pseudomonadales

63,995

0.05

42

123.62

0.05

0.49

Corynebacterineae

60,848

0.04

42

131.46

0.05

0.64

Alteromonadales

53,527

0.04

38

117.26

0.05

0.46

Xanthomonadales

52,402

0.04

22

51.03

0.02

0.59

Bacillales

51,263

0.04

48

112.49

0.04

0.38

Clostridiales

36,679

0.03

40

100.98

0.04

0.33

Lactobacillales

33,633

0.02

66

100.23

0.04

0.39

(Other)

547,912

0.40

662

1124.01

0.44

NA


Warren et al. BMC Bioinformatics 2010 11:131   doi:10.1186/1471-2105-11-131

Open Data