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BMC Bioinformatics

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Editor-in-Chief
Melissa Norton, MD

Biology Editor
Penelope Webb, PhD

In-house Editor
Danielle Burgess PhD



 

 

BMC Bioinformatics publishes selected research, proceedings and collections of thematic reviews as supplements. All articles published in supplements are subject to peer review and are free to access online. The journal also publishes supplements containing meeting abstracts.
Contents of Volume 10 Suppl 9
Proceedings of the 2009 AMIA Summit on Translational Bioinformatics
Proceedings
from 2009 AMIA Summit on Translational Bioinformatics
San Francisco, CA, USA. 1517 March 2009

Introduction
Selected proceedings of the 2009 Summit on Translational Bioinformatics
Yves A Lussier, Indra Neil Sarkar
BMC Bioinformatics 2009, 10(Suppl 9):I1 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Introduction
Transcriptional network classifiers
Hsun-Hsien Chang, Marco F Ramoni
BMC Bioinformatics 2009, 10(Suppl 9):S1 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
Analysis of AML genes in dysregulated molecular networks
Eunjung Lee, Hyunchul Jung, Predrag Radivojac, Jong-Won Kim, Doheon Lee
BMC Bioinformatics 2009, 10(Suppl 9):S2 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
Network analysis of genes regulated in renal diseases: implications for a molecular-based classification
Suresh K Bhavnani, Felix Eichinger, Sebastian Martini, Paul Saxman, HV Jagadish, Matthias Kretzler
BMC Bioinformatics 2009, 10(Suppl 9):S3 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
Infection in the intensive care unit alters physiological networks
Adam D Grossman, Mitchell J Cohen, Geoffrey T Manley, Atul J Butte
BMC Bioinformatics 2009, 10(Suppl 9):S4 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
A systems biology approach to the identification and analysis of transcriptional regulatory networks in osteocytes
Angela K Dean, Stephen E Harris, Ivo Kalajzic, Jianhua Ruan
BMC Bioinformatics 2009, 10(Suppl 9):S5 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
Mechanism-anchored profiling derived from epigenetic networks predicts outcome in acute lymphoblastic leukemia
Xinan Yang, Yong Huang, James L Chen, Jianming Xie, Xiao Sun, Yves A Lussier
BMC Bioinformatics 2009, 10(Suppl 9):S6 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
PAPAyA: a platform for breast cancer biomarker signature discovery, evaluation and assessment
Angel Janevski, Sitharthan Kamalakaran, Nilanjana Banerjee, Vinay Varadan, Nevenka Dimitrova
BMC Bioinformatics 2009, 10(Suppl 9):S7 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
The potential for automated question answering in the context of genomic medicine: an assessment of existing resources and properties of answers
Casey Lynnette Overby, Peter Tarczy-Hornoch, Dina Demner-Fushman
BMC Bioinformatics 2009, 10(Suppl 9):S8 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
Towards large-scale sample annotation in gene expression repositories
Erik Pitzer, Ronilda Lacson, Christian Hinske, Jihoon Kim, Pedro AF Galante, Lucila Ohno-Machado
BMC Bioinformatics 2009, 10(Suppl 9):S9 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
Evaluation of a large-scale biomedical data annotation initiative
Ronilda Lacson, Erik Pitzer, Christian Hinske, Pedro Galante, Lucila Ohno-Machado
BMC Bioinformatics 2009, 10(Suppl 9):S10 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
Evaluating the accuracy of a functional SNP annotation system
Terry H Shen, Christopher S Carlson, Peter Tarczy-Hornoch
BMC Bioinformatics 2009, 10(Suppl 9):S11 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
Developing a manually annotated clinical document corpus to identify phenotypic information for inflammatory bowel disease
Brett R South, Shuying Shen, Makoto Jones, Jennifer Garvin, Matthew H Samore, Wendy W Chapman, Adi V Gundlapalli
BMC Bioinformatics 2009, 10(Suppl 9):S12 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
Characterizing environmental and phenotypic associations using information theory and electronic health records
Xiaoyan Wang, George Hripcsak, Carol Friedman
BMC Bioinformatics 2009, 10(Suppl 9):S13 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
Comparison of concept recognizers for building the Open Biomedical Annotator
Nigam H Shah, Nipun Bhatia, Clement Jonquet, Daniel Rubin, Annie P Chiang, Mark A Musen
BMC Bioinformatics 2009, 10(Suppl 9):S14 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
Feature selection for fMRI-based deception detection
Bo Jin, Alvin Strasburger, Steven J Laken, F Andrew Kozel, Kevin A Johnson, Mark S George, Xinghua Lu
BMC Bioinformatics 2009, 10(Suppl 9):S15 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
Knowledge-based variable selection for learning rules from proteomic data
Jonathan L Lustgarten, Shyam Visweswaran, Robert P Bowser, William R Hogan, Vanathi Gopalakrishnan
BMC Bioinformatics 2009, 10(Suppl 9):S16 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Proceedings
Structural similarity assessment for drug sensitivity prediction in cancer
Pavithra Shivakumar, Michael Krauthammer
BMC Bioinformatics 2009, 10(Suppl 9):S17 (17September2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

 

 

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