Supplements
Editor-in-Chief Melissa Norton, MD
Biology Editor Penelope Webb, PhD
In-house Editor Danielle Burgess PhD
BMC Bioinformatics publishes selected research, proceedings and collections of thematic reviews as supplements. All articles published in supplements are subject to peer review and are free to access online. The journal also publishes supplements containing meeting abstracts.
Contents of Volume 10 Suppl 9
Proceedings of the 2009 AMIA Summit on Translational Bioinformatics
Proceedings
from 2009 AMIA Summit on Translational Bioinformatics
San Francisco, CA, USA. 15
17 March 2009
Introduction
Selected proceedings of the 2009 Summit on Translational Bioinformatics Yves A Lussier, Indra Neil Sarkar BMC Bioinformatics 2009, 10 (Suppl 9):I1 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Introduction
Transcriptional network classifiers Hsun-Hsien Chang, Marco F Ramoni BMC Bioinformatics 2009, 10 (Suppl 9):S1 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Analysis of AML genes in dysregulated molecular networks Eunjung Lee, Hyunchul Jung, Predrag Radivojac, Jong-Won Kim, Doheon Lee BMC Bioinformatics 2009, 10 (Suppl 9):S2 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Network analysis of genes regulated in renal diseases: implications for a molecular-based classification Suresh K Bhavnani, Felix Eichinger, Sebastian Martini, Paul Saxman, HV Jagadish, Matthias Kretzler BMC Bioinformatics 2009, 10 (Suppl 9):S3 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Infection in the intensive care unit alters physiological networks Adam D Grossman, Mitchell J Cohen, Geoffrey T Manley, Atul J Butte BMC Bioinformatics 2009, 10 (Suppl 9):S4 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
A systems biology approach to the identification and analysis of transcriptional regulatory networks in osteocytes Angela K Dean, Stephen E Harris, Ivo Kalajzic, Jianhua Ruan BMC Bioinformatics 2009, 10 (Suppl 9):S5 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Mechanism-anchored profiling derived from epigenetic networks predicts outcome in acute lymphoblastic leukemia Xinan Yang, Yong Huang, James L Chen, Jianming Xie, Xiao Sun, Yves A Lussier BMC Bioinformatics 2009, 10 (Suppl 9):S6 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
PAPAyA: a platform for breast cancer biomarker signature discovery, evaluation and assessment Angel Janevski, Sitharthan Kamalakaran, Nilanjana Banerjee, Vinay Varadan, Nevenka Dimitrova BMC Bioinformatics 2009, 10 (Suppl 9):S7 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
The potential for automated question answering in the context of genomic medicine: an assessment of existing resources and properties of answers Casey Lynnette Overby, Peter Tarczy-Hornoch, Dina Demner-Fushman BMC Bioinformatics 2009, 10 (Suppl 9):S8 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Towards large-scale sample annotation in gene expression repositories Erik Pitzer, Ronilda Lacson, Christian Hinske, Jihoon Kim, Pedro AF Galante, Lucila Ohno-Machado BMC Bioinformatics 2009, 10 (Suppl 9):S9 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Evaluation of a large-scale biomedical data annotation initiative Ronilda Lacson, Erik Pitzer, Christian Hinske, Pedro Galante, Lucila Ohno-Machado BMC Bioinformatics 2009, 10 (Suppl 9):S10 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Evaluating the accuracy of a functional SNP annotation system Terry H Shen, Christopher S Carlson, Peter Tarczy-Hornoch BMC Bioinformatics 2009, 10 (Suppl 9):S11 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Developing a manually annotated clinical document corpus to identify phenotypic information for inflammatory bowel disease Brett R South, Shuying Shen, Makoto Jones, Jennifer Garvin, Matthew H Samore, Wendy W Chapman, Adi V Gundlapalli BMC Bioinformatics 2009, 10 (Suppl 9):S12 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Characterizing environmental and phenotypic associations using information theory and electronic health records Xiaoyan Wang, George Hripcsak, Carol Friedman BMC Bioinformatics 2009, 10 (Suppl 9):S13 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Comparison of concept recognizers for building the Open Biomedical Annotator Nigam H Shah, Nipun Bhatia, Clement Jonquet, Daniel Rubin, Annie P Chiang, Mark A Musen BMC Bioinformatics 2009, 10 (Suppl 9):S14 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Feature selection for fMRI-based deception detection Bo Jin, Alvin Strasburger, Steven J Laken, F Andrew Kozel, Kevin A Johnson, Mark S George, Xinghua Lu BMC Bioinformatics 2009, 10 (Suppl 9):S15 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Knowledge-based variable selection for learning rules from proteomic data Jonathan L Lustgarten, Shyam Visweswaran, Robert P Bowser, William R Hogan, Vanathi Gopalakrishnan BMC Bioinformatics 2009, 10 (Suppl 9):S16 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Proceedings
Structural similarity assessment for drug sensitivity prediction in cancer Pavithra Shivakumar, Michael Krauthammer BMC Bioinformatics 2009, 10 (Suppl 9):S17 (17 September 2009) [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
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