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BMC Bioinformatics publishes selected collections of research articles, conference proceedings, reviews and reports as supplements, which are free to access online. All articles published in supplements are subject to peer review; meeting abstracts undergo review and selection by the conference. Find out more about publishing a supplement with BioMed Central.

Volume 10 Supplement 13

Highlights from the Fifth International Society for Computational Biology (ISCB) Student Council Symposium

Meeting abstracts

Fifth International Society for Computational Biology (ISCB) Student Council Symposium

Stockholm, Sweden

27 June 2009

Edited by Thomas Abeel

Additional Information | Conference website

Introduction   Open Access

Highlights from the 5th International Society for Computational Biology Student Council Symposium at the 17th Annual International Conference on Intelligent Systems for Molecular Biology and the 8th European Conference on Computational Biology

Thomas Abeel, Jeroen de Ridder, Lucia Peixoto BMC Bioinformatics 2009, 10(Suppl 13):I1 (19 October 2009)

Full text | PDF | PubMed | Cited on BioMed Central

Oral presentation   Open Access

KIRMES: kernel-based identification of regulatory modules in euchromatic sequences

Sebastian J Schultheiss, Wolfgang Busch, Jan Lohmann, Oliver Kohlbacher, Gunnar Rätsch BMC Bioinformatics 2009, 10(Suppl 13):O1 (19 October 2009)

Full text | PDF

Oral presentation   Open Access

Paired-end read length lower bounds for genome re-sequencing

Rayan Chikhi, Dominique Lavenier BMC Bioinformatics 2009, 10(Suppl 13):O2 (19 October 2009)

Full text | PDF

Oral presentation   Open Access

Prediction of super-secondary structure in α-helical and β-barrel transmembrane proteins

Van Du Tran, Philippe Chassignet, Jean-Marc Steyaert BMC Bioinformatics 2009, 10(Suppl 13):O3 (19 October 2009)

Full text | PDF

Oral presentation   Open Access

Core stemness mechanisms revealed through homology

Martina Koeva, E Camilla Forsberg, Josh M Stuart BMC Bioinformatics 2009, 10(Suppl 13):O4 (19 October 2009)

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Oral presentation   Open Access

Functionally informative tag SNP selection using a pareto-optimal approach: playing the game of life

Phil Lee, Jae-Yoon Jung, Hagit Shatkay BMC Bioinformatics 2009, 10(Suppl 13):O5 (19 October 2009)

Full text | PDF

Oral presentation   Open Access

Looking for chromosome spatial organization rules in microarray gene expression data

Teresa Szczepińska, Krzysztof Pawłowski BMC Bioinformatics 2009, 10(Suppl 13):O6 (19 October 2009)

Full text | PDF

Oral presentation   Open Access

Visualization of large microarray experiments with space maps

Nils Gehlenborg, Alvis Brazma BMC Bioinformatics 2009, 10(Suppl 13):O7 (19 October 2009)

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Poster presentation   Open Access

Probabilistic retrieval and visualization of biologically relevant microarray experiments

José Caldas, Nils Gehlenborg, Ali Faisal, Alvis Brazma, Samuel Kaski BMC Bioinformatics 2009, 10(Suppl 13):P1 (19 October 2009)

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Poster presentation   Open Access

PAUL: protein structural alignment using integer linear programming and Lagrangian relaxation

Inken Wohlers, Lars Petzold, Francisco S Domingues, Gunnar W Klau BMC Bioinformatics 2009, 10(Suppl 13):P2 (19 October 2009)

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Poster presentation   Open Access

A method for validation for clustering of phenotypic gene knockdown profiles using protein-protein interactions information

Nikolay Samusik, Yannis Kalaidzidis, Marino Zerial BMC Bioinformatics 2009, 10(Suppl 13):P3 (19 October 2009)

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Poster presentation   Open Access

Phylogenomic inference of functional divergence

Tom A Williams, Brian E Caffrey, Xiaowei Jiang, Christina Toft, Mario A Fares BMC Bioinformatics 2009, 10(Suppl 13):P4 (19 October 2009)

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Poster presentation   Open Access

Transcript quantification with RNA-Seq data

Regina Bohnert, Jonas Behr, Gunnar Rätsch BMC Bioinformatics 2009, 10(Suppl 13):P5 (19 October 2009)

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Poster presentation   Open Access

Structure and function analysis of flexible alignment regions in proteins

Walter Pirovano, Anneke Reijden, K Feenstra, Jaap Heringa BMC Bioinformatics 2009, 10(Suppl 13):P6 (19 October 2009)

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Poster presentation   Open Access

Computational methods to identify novel methyltransferases

Tanya C Petrossian, Steven G Clarke BMC Bioinformatics 2009, 10(Suppl 13):P7 (19 October 2009)

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