Supplements
Editor-in-Chief Melissa Norton, MD
Biology Editor Penelope Webb, PhD
In-house Editor Tim Sands PhD
BMC Bioinformatics publishes selected research, proceedings and collections of thematic reviews as supplements. All articles published in supplements are subject to peer review and are free to access online. The journal also publishes supplements containing meeting abstracts.
Contents of Volume 10 Suppl 12
Bioinformatics Methods for Biomedical Complex System Applications
Research
from Bioinformatics Methods for Biomedical Complex Systems Applications (NETTAB2008)
Varenna, Italy. 19
21 May 2008
Edited by Luciano Milanesi and Paolo Romano
Introduction
Trends in modeling Biomedical Complex Systems Luciano Milanesi, Paolo Romano, Gastone Castellani, Daniel Remondini, Petro Li BMC Bioinformatics 2009, 10 (Suppl 12):I1 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Data recovery and integration from public databases uncovers transformation-specific transcriptional downregulation of cAMP-PKA pathway-encoding genes Chiara Balestrieri, Lilia Alberghina, Marco Vanoni, Ferdinando Chiaradonna BMC Bioinformatics 2009, 10 (Suppl 12):S1 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
The Human EST Ontology Explorer: a tissue-oriented visualization system for ontologies distribution in human EST collections Ivan Merelli, Andrea Caprera, Alessandra Stella, Marcello Del Corvo, Luciano Milanesi, Barbara Lazzari BMC Bioinformatics 2009, 10 (Suppl 12):S2 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
In silico saturation mutagenesis and docking screening for the analysis of protein-ligand interaction: the Endothelial Protein C Receptor case study Federica Chiappori, Pasqualina D'Ursi, Ivan Merelli, Luciano Milanesi, Ermanna Rovida BMC Bioinformatics 2009, 10 (Suppl 12):S3 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Developing optimal input design strategies in cancer systems biology with applications to microfluidic device engineering Filippo Menolascina, Domenico Bellomo, Thomas Maiwald, Vitoantonio Bevilacqua, Caterina Ciminelli, Angelo Paradiso, Stefania Tommasi BMC Bioinformatics 2009, 10 (Suppl 12):S4 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Phenotypic and genotypic data integration and exploration through a web-service architecture Angelo Nuzzo, Alberto Riva, Riccardo Bellazzi BMC Bioinformatics 2009, 10 (Suppl 12):S5 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Clinical bioinformatics for complex disorders: a schizophrenia case study Emanuel Schwarz, F Markus Leweke, Sabine Bahn, Pietro Li BMC Bioinformatics 2009, 10 (Suppl 12):S6 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
XML-based approaches for the integration of heterogeneous bio-molecular data Marco Mesiti, Ernesto Jim BMC Bioinformatics 2009, 10 (Suppl 12):S7 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Identification of functionally related genes using data mining and data integration: a breast cancer case study Ettore Mosca, Gloria Bertoli, Eleonora Piscitelli, Laura Vilardo, Rolland A Reinbold, Ileana Zucchi, Luciano Milanesi BMC Bioinformatics 2009, 10 (Suppl 12):S8 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
A scale space approach for unsupervised feature selection in mass spectra classification for ovarian cancer detection Michele Ceccarelli, Antonio d'Acierno, Angelo Facchiano BMC Bioinformatics 2009, 10 (Suppl 12):S9 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Survival Online: a web-based service for the analysis of correlations between gene expression and clinical and follow-up data Luca Corradi, Valentina Mirisola, Ivan Porro, Livia Torterolo, Marco Fato, Paolo Romano, Ulrich Pfeffer BMC Bioinformatics 2009, 10 (Suppl 12):S10 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
A Perl procedure for protein identification by Peptide Mass Fingerprinting Alessandra Tiengo, Nicola Barbarini, Sonia Troiani, Luisa Rusconi, Paolo Magni BMC Bioinformatics 2009, 10 (Suppl 12):S11 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Analysis and modelling of motility of cell populations with MotoCell Concita Cantarella, Leandra Sepe, Francesca Fioretti, Maria Carla Ferrari, Giovanni Paolella BMC Bioinformatics 2009, 10 (Suppl 12):S12 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Conditional independence relations among biological markers may improve clinical decision as in the case of triple negative breast cancers Federico M Stefanini, Danila Coradini, Elia Biganzoli BMC Bioinformatics 2009, 10 (Suppl 12):S13 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
A computational framework for qualitative simulation of nonlinear dynamical models of gene-regulatory networks Liliana Ironi, Luigi Panzeri BMC Bioinformatics 2009, 10 (Suppl 12):S14 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Extraction, integration and analysis of alternative splicing and protein structure distributed information Matteo D'Antonio, Marco Masseroli BMC Bioinformatics 2009, 10 (Suppl 12):S15 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Towards a systems biology approach to mammalian cell cycle: modeling the entrance into S phase of quiescent fibroblasts after serum stimulation Roberta Alfieri, Matteo Barberis, Ferdinando Chiaradonna, Daniela Gaglio, Luciano Milanesi, Marco Vanoni, Edda Klipp, Lilia Alberghina BMC Bioinformatics 2009, 10 (Suppl 12):S16 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
Research
Protopia: a protein-protein interaction tool Alejandro Real-Chicharro, Iv BMC Bioinformatics 2009, 10 (Suppl 12):S17 (15 [Abstract ] [Full text ] [PDF ] [PubMed ] [Related articles ]
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