Figure 1.

The semantic architecture of Utopia. The Utopia architecture consists broadly of three layers: the visualisation tools, which encapsulate the User's Conceptual Model; the core, which encodes and reasons over explicit semantics in its data model; and finally, the remote resources and third-party tools with their implicit semantics.

Pettifer et al. BMC Bioinformatics 2009 10(Suppl 6):S19   doi:10.1186/1471-2105-10-S6-S19