This article is part of the supplement: Eighth International Conference on Bioinformatics (InCoB2009): Bioinformatics
Gevab: a prototype genome variation analysis browsing server
- Equal contributors
1 Korean BioInformation Center (KOBIC), KRIBB, Daejeon, Korea
2 Lee Gil Ya Cancer and Diabetes Institute, Gachon University of Medicine and Science, Incheon, Korea
3 Department of Translational Medicine, Gachon University Gil Hospital, Incheon, Korea
BMC Bioinformatics 2009, 10(Suppl 15):S3 doi:10.1186/1471-2105-10-S15-S3Published: 3 December 2009
The first Korean individual diploid genome sequence data (KOREF) was publicized in December 2008.
A Korean genome variation analysis and browsing server (Gevab) was constructed as a database and web server for the exploration and downloading of Korean personal genome(s). Information in the Gevab includes SNPs, short indels, and structural variation (SV) and comparison analysis between the NCBI human reference and the Korean genome(s). The user can find information on assembled consensus sequences, sequenced short reads, genetic variations, and relationships between genotype and phenotypes.