Additional file 2.

Example of output generated by the Array GO Mapper (AGOM). Unique identifier for the Arizona array (Oligo_ID) is displayed in column 1. Column 2–4 displays GenBank accessions, Entrez gene ID and Ensembl gene ID used for mapping. The array spot number is in column 5. The name of database and the corresponding gene product in Affymetrix annotations are shown in column 6 & 7. The GO and name of the GO term are displayed in column 8 & 9 with the evidence code for the annotation in column 10. Column 11 shows the aspects of gene ontology either molecular function (F), cellular component (C) or biological process (P). The GO Annotation Quality (GAQ) score for individual GO term is displayed in column 12 and the date the output was generated in column 13.

Format: XLS Size: 231KB Download file

This file can be viewed with: Microsoft Excel Viewer

Buza et al. BMC Bioinformatics 2009 10(Suppl 11):S2   doi:10.1186/1471-2105-10-S11-S2