Table 4

Lymphoma dataset from [1] (mature aggressive B-cell lymphoma). Mapping of node numbers in Figure 4, the abbreviations used in [1], and the molecular characteristics.

node nr

abbrev. in Jacob et al.

molecular characteristic

1

CD10

Antibodies for biomarker CD10 are present in histological section of lymphoma tissue

2

Ki-67

Antibodies for biomarker Ki-67 are present in histological section of lymphoma tissue

3

CD5

Antibodies for biomarker CD5 are present in histological section of lymphoma tissue

4

bcl6BR

Breakpoint in the BCL6 locus

5

IGH-BCL2

Fusion of BCL locus to immunoglobulin IGH

6

ABC

Gene expression profile similar to activated B-cells

7

GCB

Gene expression profile similar to germinal center B-cells

8

mBL

Gene expression signature which characterices molecular Burkitt lymphoma (Hummel et al.)

9

non-mBL

Absent gene expression signature non-mBL.

10

IG-MYC

Translocation of MYC locus involving fusion of MYC to immunoglobulins IGH, IGK or IGL

11

atyp.myc

Breakpoint in the MYC locus without fusion to an immunoglobulin

12

MYC-

No abberation of the MYC locus

13

CD10-

Antibodies for biomarker CD10 are absent in histological section of lymphoma tissue

14

Ki-67-

Antibodies for biomarker Ki-67 are absent in histological section of lymphoma tissue

15

CD5-

Antibodies for biomarker CD5 are absent in histological section of lymphoma tissue

16

bcl6BR-

No breakpoint in the BCL6 locus

17

IGH-BCL2-

No fusion of BCL locus to immunoglobulin IGH

Böcker et al. BMC Bioinformatics 2009 10(Suppl 1):S61   doi:10.1186/1471-2105-10-S1-S61