Table 3 |
|||||||||
|
Test statistic ranks of the 10 true positive genes obtained after glog, lowess, combination of glog and lowess, combination of lowess and enhanced quantile, union and intersection gene lists. |
|||||||||
|
ID |
Symbol |
lower |
FC |
upper |
raw |
glog |
lowess |
glog+lowess |
lowess+enhancedQ |
|
|
|||||||||
|
BL-003F10 |
PBX2 |
-2.02 |
-3.42 |
-4.83 |
130 |
474 |
158 |
26 |
179 |
|
BL-003F10 |
PBX2 |
-1.95 |
-3.36 |
-4.77 |
139 |
486 |
172 |
32 |
178 |
|
2-014C09 |
BTG1 |
-0.09 |
-1.94 |
-3.8 |
1080 |
7088 |
3302 |
741 |
556 |
|
BL-010C07 |
DLEU2 |
-0.99 |
-1.91 |
-2.83 |
275 |
902 |
529 |
163 |
613 |
|
BL-010C07 |
DLEU2 |
-0.81 |
-1.79 |
-2.77 |
375 |
955 |
538 |
184 |
624 |
|
2-025D04 |
CEBPA |
2.51 |
1.53 |
0.54 |
527 |
1976 |
461 |
1462 |
2191 |
|
2-029B10 |
FUS |
-0.2 |
-1.51 |
-2.81 |
746 |
7268 |
543 |
855 |
1101 |
|
2-025D04 |
CEBPA |
2.52 |
1.31 |
0.11 |
660 |
5228 |
1243 |
1678 |
677 |
|
2-029B10 |
FUS |
-0.41 |
-1.23 |
-2.05 |
685 |
1236 |
820 |
385 |
1421 |
|
2-019A01 |
CAV1 |
-0.05 |
-1.2 |
-2.34 |
1960 |
6519 |
1962 |
8034 |
1595 |
|
|
|||||||||
|
FC: fold change; upper and lower: confidence interval upper and lower bounds; Symbol: gene symbol. |
|||||||||
|
Chiogna et al. BMC Bioinformatics 2009 10:61 doi:10.1186/1471-2105-10-61 |
|||||||||
