Table 1

Summary of relative method performances.

Random background

Genomic background


Method

Type

Equiprobable

Skewed

Equiprobable

Skewed

Reference


Ri

NW

++++

++

++++

++++

[23]

Iseq

NW

++++

++++

++++

+++

[25]

Rsequence · BvH

R'sequence

W

++

+

++

+++

[27,28]

RE · BvH

RE'

W

++

+++

++

++

This work

FitomHI

W

++

+

++

++

This work


Summary of relative method performance on the search problem against different backgrounds. Increasing numbers of + signs symbolize higher accuracy. W stands for weighted and NW for non-weighted method.

Erill and O'Neill BMC Bioinformatics 2009 10:57   doi:10.1186/1471-2105-10-57

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