 Methodology articleBayesian optimal discovery procedure for simultaneous significance testingJing Cao1 1Department of Statistical Science, Southern Methodist University, Dallas, Texas, USA 2Department of Clinical Sciences, University of Texas Southwestern Medical Center, Dallas, Texas, USA 3Department of Cell Biology, University of Texas Southwestern Medical Center, Dallas, Texas, USA
BMC Bioinformatics 2009, 10:5doi:10.1186/1471-2105-10-5
Additional filesAdditional file 1: Bayesian ODP R code. This file contains the R code to calculate the posterior probability from the Bayesian model and the Bayesian ODP. Format: TXT Size: 5KB Download file Additional file 2: List of selected DE genes under Scenario 1. This file contains the list of the DE genes, along with their true expression status, identified by the different methods from the Golden Spike dataset under Scenario 1 (excluding the 10144 non-spiked-in probsets). Format: XLS Size: 109KB Download file This file can be viewed with: Microsoft Excel Viewer Additional file 3: List of selected DE genes under Scenario 2. This file contains the list of the DE genes, along with their true expression status, identified by the different methods from the Golden Spike dataset under Scenario 2 (excluding the 2,535 equal fold-change probsets). Format: XLS Size: 105KB Download file This file can be viewed with: Microsoft Excel Viewer |
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