Table 5 |
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|
Sensitivity of Information Content adjusted p-values at 5% type I error using kernel fit. |
||||||
|
Positive pair set |
DPCP |
WRUNS |
GSHGTPars |
GSCORPars |
GSHGTGeneT |
GSCORGeneT |
|
|
||||||
|
OrthoMCL |
||||||
|
TPCoPW |
16.4% |
13.6% |
0.2% |
2.2% |
5.7% |
6.5% |
|
TPPPI |
17.0% |
14.5% |
1.0% |
0.9% |
14.4% |
14.8% |
|
|
||||||
|
InterPro |
||||||
|
TPCoPW |
10.9% |
10.7% |
2.0% |
5.3% |
8.8% |
11.1% |
|
TPPPI |
3.3% |
3.9% |
4.4% |
10.4% |
14.3% |
16.8% |
|
|
||||||
|
Note: cases with information content equal to zero are always treated as insignificant. Thus sensitivity can be much lower than type I error (5%). |
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|
Ruano-Rubio et al. BMC Bioinformatics 2009 10:383 doi:10.1186/1471-2105-10-383 |
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