Construction of an annotated corpus to support biomedical information extraction
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* Corresponding author: Sophia Ananiadou sophia.ananiadou@manchester.ac.uk
BMC Bioinformatics 2009, 10:349 doi:10.1186/1471-2105-10-349
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BioMed Central: 5 citations
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Proceedings
Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011 Sampo Pyysalo, Tomoko Ohta, Rafal Rak, Dan Sullivan, Chunhong Mao, Chunxia Wang, Bruno Sobral, Jun'ichi Tsujii, Sophia Ananiadou BMC Bioinformatics 2012, 13(Suppl 11):S2 (26 June 2012) |
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Constructing a semantic predication gold standard from the biomedical literature Halil Kilicoglu, Graciela Rosemblat, Marcelo Fiszman, Thomas C Rindflesch BMC Bioinformatics 2011, 12:486 (20 December 2011) |
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The BioLexicon: a large-scale terminological resource for biomedical text mining Paul Thompson, John McNaught, Simonetta Montemagni, Nicoletta Calzolari, Riccardo del Gratta, Vivian Lee, Simone Marchi, Monica Monachini, Piotr Pezik, Valeria Quochi, CJ Rupp, Yutaka Sasaki, Giulia Venturi, Dietrich Rebholz-Schuhmann, Sophia Ananiadou BMC Bioinformatics 2011, 12:397 (12 October 2011) |
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Research article
Enriching a biomedical event corpus with meta-knowledge annotation Paul Thompson, Raheel Nawaz, John McNaught, Sophia Ananiadou BMC Bioinformatics 2011, 12:393 (10 October 2011) An annotation scheme for meta-knowledge enrichment of biomedical event corpora achieves high levels of inter-annotator agreement when applied to the GENIA event corpus, and facilitates more sophisticated training of information extraction systems.
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Research
Event extraction for DNA methylation Tomoko Ohta, Sampo Pyysalo, Makoto Miwa, Jun’ichi Tsujii Journal of Biomedical Semantics 2011, 2(Suppl 5):S2 (6 October 2011) |