Software
GenomeGraphs: integrated genomic data visualization with R
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* Corresponding authors: Steffen Durinck steffen@stat.berkeley.edu - James Bullard bullard@berkeley.edu
- † Equal contributors
BMC Bioinformatics 2009, 10:2 doi:10.1186/1471-2105-10-2
Correction to code for example II
Neil Saunders (2010-03-26 19:15) CSIRO
There is a small error in the code sample for example II. Line 5:
probeId = as.character(unrPositions[,1), nProbes = unrNProbes,
should read:
probeId = as.character(unrPositions[,1]), nProbes = unrNProbes,
Competing interests
None declared
Typographical error in code for Figure 2
Neil Saunders (2010-07-05 16:52) CSIRO
The code for Figure 2 contains a typo (missing right square bracket). It should read:
exon = makeExonArray(intensity = unrData, probeStart = unrPositions[,3], probeEnd = unrPositions[,4],
probeId = as.character(unrPositions[,1]), nProbes = unrNProbes,
dp = DisplayPars(color = col, mapColor = 'dodgerblue2'), displayProbesets = FALSE)
Has BMC considered formatting code on web pages? Even a simple fixed-width font would make it easier to read and copy/paste.
Competing interests
None declared
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