Table 1 |
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The relationships between high level MIFlowCyt terms and FuGEFlow classes |
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MIFlowCyt term |
FuGEFlow class |
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Experiment Overview |
1.1 Purpose |
FuGE::Bio::Investigation::HigherLevelAnalysis |
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1.2 Keywords |
FuGE::Bio::Investigation::Investigation |
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1.3 Experiment Variables |
FuGE::Bio::Investigation::Investigation |
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1.4 Organization |
FuGE::Common::Audit::ContactRole |
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1.5 Primary Contact |
FuGE::Common::Audit::ContactRole |
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1.6 Date |
FuGE::Bio::Investigation::Investigation |
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1.7 Conclusion |
FuGE::Bio::Investigation::HigherLevelAnalysis |
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1.8 Quality Control Measures |
FuGE::Bio::Investigation::InvestigationComponent |
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1.9 Other Relevant Experiment Information |
FuGE::Bio::Investigation::Investigation |
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Specimen Details |
2.1 Specimen Material Description |
FCM::Sample; FCM::Organism |
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2.2 Sample Treatment(s) Description |
FuGE::Common::Protocol::GenericProtoclApplication |
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2.3 Fluorescence Reagent Description |
FCM::FluorescentReagent |
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Instrument Details |
3.1 Manufacturer |
FuGE::Equipment; FCM::Cytometer |
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3.2 Model |
FuGE::Equipment; FCM::Cytometer |
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3.3 Configuration and Settings |
FuGE::Equipment |
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3.4 Other Relevant Instrument Settings |
FCM::Cytometer |
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Data Analysis Details |
4.1 List-Mode Data File |
FCM::ListModeDataFile |
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4.2 Compensation Details |
FCM::CompensationProtocol |
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4.3 Gating (Data Filtering) Details |
FCM::DataFilteringProtocol |
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4.4 Data Transformation Details |
FCM::DataTransformationProtocol |
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Qian et al. BMC Bioinformatics 2009 10:184 doi:10.1186/1471-2105-10-184 |
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