Table 2

Performance scores on entities and relations in Blind set (138 abstracts)

Entities

Recall

Precision

F Measure

Relations

Recall

Precision

F Measure

Organism (1362 entities)

92.0

98.1

94.9

Gene or Gene Product Roles (615 relations)

62.5

82.9

70.9

Strain (554 entities)

81.1

82.9

81.9

Mutation Phenotypes (149 relations)

58.5

77.8

66.7

Enzyme (386 entities)

85.7

81.6

83.5

Organism Pathogenesis (34 relations)

68.9

83.1

75.1

Gene (916 entities)

93.6

93.7

93.6

Gene Product (1425 entities)

92.3

94.8

93.5

Operon (310 entities)

96.2

93.0

94.5

Zaremba et al. BMC Bioinformatics 2009 10:177   doi:10.1186/1471-2105-10-177