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Open Access Highly Accessed Software

SDRF2GRAPH – a visualization tool of a spreadsheet-based description of experimental processes

Hideya Kawaji*, Yoshihide Hayashizaki and Carsten O Daub

Author Affiliations

RIKEN Omics Science Center, RIKEN Yokohama Institute, 1-7-22 Suehiro-cho Tsurumi-ku Yokohama, Kanagawa, 230-0045 Japan

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BMC Bioinformatics 2009, 10:133  doi:10.1186/1471-2105-10-133

Published: 7 May 2009

Additional files

Additional file 1:

An example of SDRF file. A part of MAGE-tab file, E-MEXP-428, which is used in Figure 3.

Format: XLSX Size: 5KB Download file

Open Data

Additional file 2:

An SDRF file for FANTOM4 data. an SDRF file for the FANTOM4 data.

Format: XLSX Size: 95KB Download file

Open Data

Additional file 3:

SDRF2GRAPH representation for the FANTOM4 data. SDRF2GRAPH output of the additional file 2.

Format: PDF Size: 342KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional file 4:

SDRF2GRAPH source code. The source code of SDRF2GRAPH.

Format: ZIP Size: 6KB Download file

Open Data