Table 4

Selected interactions for WTCCC study.

Interacted SNPs
Genotype association χ2 P value
Permutation test P value

rs4418931 ⇔ rs4523817
6.83 * 10-15
0.001382

rs6696928 ⇔ rs10493711
2.075 * 10-12
0.00216

rs262714 ⇔ rs407818
6.532 * 10-8
0.00240

rs2041377 ⇔ rs11113207
6.95 * 10-8
0.00236

rs7459039 ⇔ rs10271302
1.073 * 10-8
0.003224

rs17565060 ⇔ rs7220740
3.406 * 10-7
0.00345

rs9268230 ⇔ rs7751204
6.90 * 10-7
0.0112

rs17507967 ⇔ rs12126069
8.622 * 10-7
0.00384

rs3738369 ⇔ rs11206109
1.53 * 10-6
0.00389

This table reports the selected interactions and their genotype association χ2 P values.

Wan et al. BMC Bioinformatics 2009 10:13   doi:10.1186/1471-2105-10-13