|
Identified SNPs for WTCCC study. |
|||
| SNP reference |
Chromosome |
Genotype association χ2 P value |
Permutation test P value |
|
|
|||
| rs17163819 |
2 |
2.587 * 10-150 |
0.0042 |
|
|
|||
| rs10894818 |
12 |
1.751 * 10-120 |
0.0046 |
|
|
|||
| rs582397 |
3 |
1.089 * 10-82 |
0.0022 |
|
|
|||
| rs7596121 |
3 |
5.212 * 10-60 |
0.0022 |
|
|
|||
| rs16898558 |
6 |
1.718 * 10-52 |
0.0046 |
|
|
|||
| rs996877 |
13 |
1.566 * 10-44 |
0.0036 |
|
|
|||
| rs9387380 |
7 |
2.315 * 10-34 |
0.011 |
|
|
|||
| rs940153 |
9 |
1.032 * 10-33 |
0.0040 |
|
|
|||
| rs1456222 |
4 |
1.544 * 10-33 |
0.0048 |
|
|
|||
| rs1572075 |
5 |
1.474 * 10-23 |
0.0040 |
|
|
|||
| rs7192563 |
17 |
2.862 * 10-18 |
0.0030 |
|
|
|||
| rs17765376 |
15 |
3.277 * 10-18 |
0.0058 |
|
|
|||
| rs9532645 |
14 |
1.26 * 10-16 |
0.0028 |
|
|
|||
| rs10751815 |
11 |
1.036 * 10-15 |
0.0014 |
|
|
|||
| rs6975106 |
8 |
3.207 * 10-13 |
0.0028 |
|
This table reports the top ranked SNPs and their genotype association χ2 P values. | |||
Wan et al. BMC Bioinformatics 2009 10:13 doi:10.1186/1471-2105-10-13 |
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