|
Standard RHO enzymes used in this study. |
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| Oxygenase |
Ferredoxin |
Reductase |
||||
|
|
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| Standard RHO enzyme system |
Gene |
Prosthetic group |
Prosthetic group |
Prosthetic group |
Structure |
Accession number |
|
|
||||||
| Carbazole 1,9a-dioxygenase (P. resinovorans CA10) [44] |
carAa |
[2Fe-2S]/Fe2+ |
[2Fe-2S] |
FAD/[2Fe-2S] |
FNRN-type |
D89064 |
| Phenoxybenzoate dioxygenase (Alcaligenes sp. BR60) [45] |
cbaA |
[2Fe-2S]/Fe2+ |
None |
FMN/[2Fe-2S] |
FNRC-type |
U18133 |
| Phenoxybenzoate dioxygenase (P. pseudoalcaligenes POB310) [46] |
pobA |
[2Fe-2S]/Fe2+ |
None |
FMN/[2Fe-2S] |
FNRC-type |
X78823 |
| Phthalate dioxygenase (B. cepacoa DBO1) [13] |
ophA2 |
[2Fe-2S]/Fe2+ |
None |
FMN/[2Fe-2S] |
FNRC-type |
AF095748 |
| p-Toluenesulfonate monooxygenase (C. testosterone T-2) [47] |
tsaM |
[2Fe-2S]/Fe2+ |
None |
FMN/[2Fe-2S] |
FNRC-type |
U32622 |
| Aniline dioxygenase (Acinetobacter sp. YAA) [48] |
atdA |
[2Fe-2S]/Fe2+ |
None |
FAD/[2Fe-2S] |
FNRC-type |
D86080 |
| Aniline oxygenase (P. putida UCC22) [49] |
tdnA1 |
[2Fe-2S]/Fe2+ |
None |
FAD/[2Fe-2S] |
FNRC-type |
D85415 |
| 2-Halobenzoate 1,2-dioxygenase (P. cepacia 2CBS) [50] |
cbdA |
[2Fe-2S]/Fe2+ |
None |
FAD/[2Fe-2S] |
FNRN-type |
X79076 |
| Benzoate 1,2-dioxygenase (Acinetobacter. sp. ADP1) [51] |
BenA |
[2Fe-2S]/Fe2+ |
None |
FAD/[2Fe-2S] |
FNRN-type |
AF009224 |
| Anthranilate dioxygenase (Acinetobacter. sp. ADP1) [51] |
antA |
[2Fe-2S]/Fe2+ |
None |
FAD/[2Fe-2S] |
FNRN-type |
AF071556 |
| Phenanthrene dioxygenase (Nocardioides sp. KP7) [11] |
phdA |
[2Fe-2S]/Fe2+ |
[3Fe-4S] |
FAD |
GR-type |
AB017795 |
| Phthalate dioxygenase (Terrabacter sp. DBF63) [22] |
phtA1 |
[2Fe-2S]/Fe2+ |
[3Fe-4S] |
FAD |
GR-type |
AB084235 |
| Phthalate dioxygenase (A. keyseri 12B) [23] |
phtAa |
[2Fe-2S]/Fe2+ |
[3Fe-4S] |
FAD |
GR-type |
AF331043 |
| Phthalate dioxygenase (M. vanbaalenii PYR-1) [10] |
phtAa |
[2Fe-2S]/Fe2+ |
[3Fe-4S] |
FAD |
GR-type |
AY365117 |
| Phthalate dioxygenase (Rhodococcus sp. RHA1) [34] |
padAa2 |
[2Fe-2S]/Fe2+ |
[3Fe-4S] |
FAD |
GR-type |
AB154537 |
| 3,4-Dihydroxyphenanthrene dioxygenase (A. faecalis AFK2) [52] |
phnAc |
[2Fe-2S]/Fe2+ |
[2Fe-2S] |
FAD/[2Fe-2S] |
FNRN-type |
AB024945 |
| Naphthalene dioxygenase (Pseudomonas sp. 9816-4) [12] |
nahAc |
[2Fe-2S]/Fe2+ |
[2Fe-2S] |
FAD/[2Fe-2S] |
FNRN-type |
U49496 |
| PAH dioxygenase (P. putida OUS82) [53] |
pahAc |
[2Fe-2S]/Fe2+ |
[2Fe-2S] |
FAD/[2Fe-2S] |
FNRN-type |
AB004059 |
| Carbazole dioxygenase (Sphingomonas sp. CB3) [54] |
carAa |
[2Fe-2S]/Fe2+ |
[2Fe-2S] |
FAD |
GR-type |
AF060489 |
| Dioxin dioxygenase (Sphingomonas sp. RW1) [14] |
dxnA1 |
[2Fe-2S]/Fe2+ |
[2Fe-2S] |
FAD |
GR-type |
X72850 |
| Biphenyl dioxygenase (Rhodococcus sp. RHA1) [55] |
bphA1 |
[2Fe-2S]/Fe2+ |
[2Fe-2S] |
FAD |
GR-type |
D32142 |
| Toluene dioxygenase (P. putida F1) [56] |
todC1 |
[2Fe-2S]/Fe2+ |
[2Fe-2S] |
FAD |
GR-type |
J04996 |
| Biphenyl dioxygenase (Pseudomonas sp. KKS102) [57] |
bphA1 |
[2Fe-2S]/Fe2+ |
[2Fe-2S] |
FAD |
GR-type |
D17319 |
| Biphenyl 2,3-dioxygenase (B. xenovorans LB400) [58] |
bphA |
[2Fe-2S]/Fe2+ |
[2Fe-2S] |
FAD |
GR-type |
M86348 |
| Biphenyl dioxygenase (P. pseudoalcaligenes KF707) [59] |
bphA1 |
[2Fe-2S]/Fe2+ |
[2Fe-2S] |
FAD |
GR-type |
M83673 |
Kweon et al. BMC Biochemistry 2008 9:11 doi:10.1186/1471-2091-9-11 |
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