Table 1

Amino acid sequences of the linker region from fungal GAs. Potential glycosylation sites in the linker sequences were predicted by the NetNGlyc and NetOGlyc programs. The predicted N-glycosylation sites are underlined and the putative O-glycosylation sites are labeled in bold.

GA*
Position (aa)
Linker sequence

RoGA
132–167
SKPTTTTATTTTTTAPSTSTTTRPSSSEPATFPTGN
AnGA
494–531
ATGGTTTTATPTGSGSVTSTSKTTATASKTSTSTSSTS
HrGA
500–504
NVTSS
HgGA
490–508
SKQTPNPSAAPSPSPYPTA
McGA
129–177
SVTTTTTTAPTTTTSGGSSTTTGGSTTTATSVPTGVPSGFPTGNSTISS
NcGA
494–519
ATATATSFPANLTPASTTVTPPTQTG

*GenBank or GenPept accession numbers are as follows: Ro, Rhizopus oryzae (from Simpson Biotech); An, Aspergillus niger (AAP04499); Hr, Hormoconis resinae (Q03045); Hg, Humicola grisea (AAA33386); Mc, Mucor circinelloides (AAN85206); and Nc, Neurospora crassa (P14804).

Lin et al. BMC Biochemistry 2007 8:9   doi:10.1186/1471-2091-8-9