|
Parameter estimates of the reductase models. Fits to data are as shown in Figure 2. |
|||||||||||||
| substrate |
KsdATP |
KsATP |
KsdTTP |
KsdGTP |
KidATP |
KiATP |
KaATP |
k2 |
k2dA |
k2A |
k2e |
k4 |
k6 |
|
|
|||||||||||||
| ADP |
2 |
200 |
2.4b |
0.5 |
1.25 |
300 |
2000d |
0.21 |
0.03 |
0.16 |
|||
| GDP |
1 |
100 |
0.5 |
2 |
2 |
190 |
2400 |
0.28a |
0.04 |
0.19 |
|||
| CDP |
2 |
70 |
1.55b |
2c |
1.5 |
600 |
1400 |
0.25a |
0.29a |
0.08 |
0.32 |
||
| UDP |
1 |
100 |
0.7b |
2c |
0.5 |
200 |
800 |
0.26 |
0.26 |
0.26a |
|||
|
Binding constants in μM, rate constants in 1/s. afixed values taken directly from table 5 of [5]. busing Eq. 10, these were adjusted to yield fluxes of 12.5, 12.5, 20 and 5 (uM/min) for ADP, GDP, CDP and UDP, respectively, under assumptions of E0 = 16 μM, ADP = 430 μM, GDP = 110 μM, CDP = 55 μM, UDP = 170 μM, KmADP = 12 μM, KmGDP = 4.9 μM, KmCDP = 2 μM, KmUDP = 6.4 μM, ATP = 1450 μM, dATP = 10.5 μM, dGTP = 7.3 μM, dTTP = 30 μM and the remaining parameter values in Table 1, see [7]. cno data, thus, these can be assumed to have any value between .5 and 2; a default value of 2 was carried down from GDP. dno data, 2000 is based on the other rows. | |||||||||||||
Radivoyevitch et al. BMC Biochemistry 2005 6:8 doi:10.1186/1471-2091-6-8 |
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